Gene_name Class CGID Hypp0 Hypp1 Hypp2 Hypp3 Hypp4 Tissue Population xQTL EIF2S2 Basal cell carcinoma CGS01 0.00118 0.00034 0.181 0.0515 0.766 Brain_Caudate_basal_ganglia EUR 3'aQTL VPS9D1 Basal cell carcinoma CGS01 9.93e-06 0.000342 0.000523 0.017 0.982 Brain_Caudate_basal_ganglia EUR eQTL OSGEP Breast CGS02 9.83e-25 0.00333 1.22e-24 0.00316 0.994 Brain_Caudate_basal_ganglia EUR 3'aQTL ARL14EP Breast CGS02 1.55e-05 0.0239 1.22e-05 0.0178 0.958 Brain_Caudate_basal_ganglia EUR eQTL DIDO1 Breast CGS02 9.67e-07 7.23e-07 0.0112 0.00737 0.981 Brain_Caudate_basal_ganglia EUR eQTL DNAJA1 Breast CGS02 0.000952 0.000178 0.115 0.0208 0.863 Brain_Caudate_basal_ganglia EUR eQTL FAM227A Breast CGS02 4.96e-11 1.8e-09 0.00123 0.0436 0.955 Brain_Caudate_basal_ganglia EUR eQTL GSPT1 Breast CGS02 3.87e-11 3.92e-11 0.0124 0.0116 0.976 Brain_Caudate_basal_ganglia EUR eQTL GTF2A1L Breast CGS02 8.44e-06 0.0266 1.18e-05 0.0363 0.937 Brain_Caudate_basal_ganglia EUR eQTL HELB Breast CGS02 3.43e-06 0.0603 4.07e-06 0.0706 0.869 Brain_Caudate_basal_ganglia EUR eQTL KIAA1614 Breast CGS02 1.33e-05 1.03e-06 0.201 0.0147 0.785 Brain_Caudate_basal_ganglia EUR eQTL KMT5C Breast CGS02 0.000215 3.55e-06 0.123 0.00115 0.876 Brain_Caudate_basal_ganglia EUR eQTL KRTCAP3 Breast CGS02 9.21e-15 1.5e-11 1.61e-05 0.0252 0.975 Brain_Caudate_basal_ganglia EUR eQTL MTOR Breast CGS02 0.0194 0.0344 0.022 0.0382 0.886 Brain_Caudate_basal_ganglia EUR eQTL NBR2 Breast CGS02 2.18e-48 3.54e-07 2.68e-43 0.0426 0.957 Brain_Caudate_basal_ganglia EUR eQTL PGAP3 Breast CGS02 8.03e-06 1.41e-05 0.0119 0.02 0.968 Brain_Caudate_basal_ganglia EUR eQTL PNP Breast CGS02 5.58e-06 1.19e-06 0.0206 0.00342 0.976 Brain_Caudate_basal_ganglia EUR eQTL POLG Breast CGS02 1.49e-15 1.63e-14 0.0114 0.123 0.865 Brain_Caudate_basal_ganglia EUR eQTL RAD54L Breast CGS02 0.000236 0.000119 0.0458 0.0222 0.932 Brain_Caudate_basal_ganglia EUR eQTL SLC25A12 Breast CGS02 2.11e-05 0.000434 0.00257 0.052 0.945 Brain_Caudate_basal_ganglia EUR eQTL SNX17 Breast CGS02 9.15e-12 2.16e-11 0.016 0.0369 0.947 Brain_Caudate_basal_ganglia EUR eQTL STX6 Breast CGS02 2.67e-11 9.28e-07 4.03e-07 0.013 0.987 Brain_Caudate_basal_ganglia EUR eQTL SYCP2L Breast CGS02 3.24e-12 7.61e-12 0.0252 0.0583 0.916 Brain_Caudate_basal_ganglia EUR eQTL TDRD3 Breast CGS02 1.71e-11 9.02e-12 0.0428 0.0217 0.936 Brain_Caudate_basal_ganglia EUR eQTL UIMC1 Breast CGS02 2.66e-28 4.37e-29 0.107 0.0167 0.877 Brain_Caudate_basal_ganglia EUR eQTL AMFR Breast CGS03 7.82e-10 0.00042 1.54e-07 0.0819 0.918 Brain_Caudate_basal_ganglia EUR 3'aQTL CRTC1 Breast CGS03 0.1 0.00623 0.112 0.00618 0.776 Brain_Caudate_basal_ganglia EUR 3'aQTL DDA1 Breast CGS03 0.000567 7.18e-05 0.2 0.0246 0.774 Brain_Caudate_basal_ganglia EUR 3'aQTL SGSM3 Breast CGS03 1.13e-13 3.52e-14 0.129 0.0396 0.831 Brain_Caudate_basal_ganglia EUR 3'aQTL SMG9 Breast CGS03 4.67e-15 1.27e-15 0.0929 0.0244 0.883 Brain_Caudate_basal_ganglia EUR 3'aQTL ADCY3 Breast CGS03 2.33e-08 7.55e-07 0.00545 0.176 0.819 Brain_Caudate_basal_ganglia EUR eQTL ANKLE1 Breast CGS03 0.000531 0.000687 0.0304 0.0384 0.93 Brain_Caudate_basal_ganglia EUR eQTL APOBEC3B Breast CGS03 2.33e-06 1.59e-07 0.194 0.0124 0.793 Brain_Caudate_basal_ganglia EUR eQTL ATG10 Breast CGS03 1.88e-13 1.82e-08 7.9e-07 0.0757 0.924 Brain_Caudate_basal_ganglia EUR eQTL CRLF3 Breast CGS03 7.15e-06 1.03e-05 0.0604 0.086 0.854 Brain_Caudate_basal_ganglia EUR eQTL EFEMP2 Breast CGS03 1.6e-07 3.5e-08 0.165 0.0353 0.8 Brain_Caudate_basal_ganglia EUR eQTL ELL Breast CGS03 0.000833 6.57e-06 0.117 3.78e-05 0.882 Brain_Caudate_basal_ganglia EUR eQTL KCNN4 Breast CGS03 3.79e-07 7.36e-05 0.000123 0.0229 0.977 Brain_Caudate_basal_ganglia EUR eQTL LRRC25 Breast CGS03 4.99e-14 1.31e-14 0.0105 0.00176 0.988 Brain_Caudate_basal_ganglia EUR eQTL NAGLU Breast CGS03 0.0286 0.00711 0.171 0.0419 0.751 Brain_Caudate_basal_ganglia EUR eQTL NIT2 Breast CGS03 0.00584 0.0969 0.00122 0.0193 0.877 Brain_Caudate_basal_ganglia EUR eQTL NTN4 Breast CGS03 3.28e-34 6.37e-35 0.0535 0.00947 0.937 Brain_Caudate_basal_ganglia EUR eQTL PLEKHA1 Breast CGS03 0.000866 4.69e-05 0.19 0.0095 0.799 Brain_Caudate_basal_ganglia EUR eQTL PRDX1 Breast CGS03 0.00646 0.00749 0.0797 0.0917 0.815 Brain_Caudate_basal_ganglia EUR eQTL PSMD6-AS2 Breast CGS03 0.0355 0.00196 0.182 0.00928 0.771 Brain_Caudate_basal_ganglia EUR eQTL RASA4 Breast CGS03 0.0194 0.0117 0.093 0.0553 0.821 Brain_Caudate_basal_ganglia EUR eQTL SLC2A8 Breast CGS03 0.000483 0.0647 7.63e-05 0.00929 0.925 Brain_Caudate_basal_ganglia EUR eQTL THBS3 Breast CGS03 0.00205 0.000397 0.203 0.0387 0.756 Brain_Caudate_basal_ganglia EUR eQTL ZNF45 Breast CGS03 3.24e-10 1.87e-10 0.0681 0.0384 0.894 Brain_Caudate_basal_ganglia EUR eQTL APOBEC3B Breast CGS05 0.00176 0.000116 0.183 0.0112 0.804 Brain_Caudate_basal_ganglia EUR eQTL NTN4 Breast CGS05 4e-07 7.5e-08 0.0786 0.0138 0.908 Brain_Caudate_basal_ganglia EUR eQTL UTP23 Colorectal CGS07 0.00948 0.00371 0.106 0.0406 0.84 Brain_Caudate_basal_ganglia EAS eQTL CTNNAL1 Breast CGS08 0.0233 0.146 0.00884 0.0546 0.768 Brain_Caudate_basal_ganglia EUR eQTL NTN4 Breast CGS08 9.47e-08 1.78e-08 0.0703 0.0123 0.917 Brain_Caudate_basal_ganglia EUR eQTL NF1 Female genital organs CGS10 0.000499 0.00231 0.0183 0.0836 0.895 Brain_Caudate_basal_ganglia EUR eQTL LYNX1 Gastric CGS13 0.148 0.023 0.0167 0.00179 0.81 Brain_Caudate_basal_ganglia EAS eQTL PSCA Gastric CGS13 2.84e-39 4.45e-38 0.00136 0.0203 0.978 Brain_Caudate_basal_ganglia EAS eQTL THBS3 Gastric CGS13 8.93e-31 5.79e-32 0.105 0.00594 0.889 Brain_Caudate_basal_ganglia EAS eQTL ABT1 Lung CGS19 0.000142 0.000724 0.0408 0.208 0.751 Brain_Caudate_basal_ganglia EUR eQTL RAD52 Lung CGS19 2.91e-06 5.71e-05 0.000719 0.0131 0.986 Brain_Caudate_basal_ganglia EUR eQTL NTN4 Breast CGS23 7.7e-05 1.44e-05 0.115 0.0207 0.864 Brain_Caudate_basal_ganglia EUR eQTL HFM1 Lymphoma CGS25 0.0257 0.145 0.0113 0.0632 0.755 Brain_Caudate_basal_ganglia EUR eQTL MIR4435-2HG Lymphoma CGS26 0.00101 0.000508 0.141 0.0706 0.786 Brain_Caudate_basal_ganglia EUR eQTL OTX1 Male genital organs CGS29 0.000506 0.000112 0.201 0.0437 0.754 Brain_Caudate_basal_ganglia EUR eQTL TCEA2 Male genital organs CGS29 0.0327 0.00523 0.0837 0.0125 0.866 Brain_Caudate_basal_ganglia EUR eQTL SPATA33 Melanoma CGS30 0.0124 0.0147 0.0122 0.0135 0.947 Brain_Caudate_basal_ganglia EUR eQTL VPS9D1 Melanoma CGS30 1.96e-11 6.76e-10 0.000433 0.0139 0.986 Brain_Caudate_basal_ganglia EUR eQTL ACAT2 Prostate CGS35 7.75e-06 5.32e-06 0.128 0.0869 0.785 Brain_Caudate_basal_ganglia EUR eQTL BHLHA15 Prostate CGS35 6.03e-37 1.37e-32 1.38e-06 0.0305 0.969 Brain_Caudate_basal_ganglia EUR eQTL DIS3L Prostate CGS35 0.000435 0.171 8.94e-06 0.00269 0.826 Brain_Caudate_basal_ganglia EUR eQTL DUBR Prostate CGS35 1.93e-05 3.04e-05 0.00477 0.00655 0.989 Brain_Caudate_basal_ganglia EUR eQTL FANCE Prostate CGS35 1.37e-06 6.31e-05 0.00429 0.196 0.799 Brain_Caudate_basal_ganglia EUR eQTL GGCX Prostate CGS35 7.41e-24 4.62e-20 5.71e-06 0.0346 0.965 Brain_Caudate_basal_ganglia EUR eQTL NUCKS1 Prostate CGS35 4.49e-05 3.42e-05 0.0568 0.0424 0.901 Brain_Caudate_basal_ganglia EUR eQTL OTX1 Prostate CGS35 9.61e-44 2.25e-44 0.109 0.0248 0.866 Brain_Caudate_basal_ganglia EUR eQTL PCAT19 Prostate CGS35 1.96e-20 5.98e-20 0.00484 0.0138 0.981 Brain_Caudate_basal_ganglia EUR eQTL PM20D1 Prostate CGS35 6.13e-07 0.00014 0.000794 0.18 0.819 Brain_Caudate_basal_ganglia EUR eQTL RAB29 Prostate CGS35 1.02e-06 0.00011 0.00128 0.138 0.861 Brain_Caudate_basal_ganglia EUR eQTL RAD9A Prostate CGS35 0.000467 0.000245 0.143 0.0743 0.782 Brain_Caudate_basal_ganglia EUR eQTL CALHM6 Prostate CGS36 0.00103 0.0176 0.0113 0.192 0.778 Brain_Caudate_basal_ganglia EAS eQTL LDAH Prostate CGS36 2.38e-16 0.000293 2.12e-14 0.0251 0.975 Brain_Caudate_basal_ganglia EAS eQTL NKX3-1 Prostate CGS36 2.39e-30 1.18e-30 0.111 0.0542 0.835 Brain_Caudate_basal_ganglia EAS eQTL NRIP1 Prostate CGS36 0.0357 0.00858 0.0309 0.00651 0.918 Brain_Caudate_basal_ganglia EAS eQTL OTX1 Prostate CGS37 0.000182 4.02e-05 0.196 0.0425 0.761 Brain_Caudate_basal_ganglia EUR eQTL TCEA2 Prostate CGS37 0.00577 0.000924 0.0921 0.0139 0.887 Brain_Caudate_basal_ganglia EUR eQTL CDK10 Skin CGS39 1.45e-11 1.45e-13 0.0906 0 0.909 Brain_Caudate_basal_ganglia EUR eQTL RPRD2 Skin CGS39 0.00206 0.00593 0.045 0.129 0.818 Brain_Caudate_basal_ganglia EUR eQTL SPATA33 Skin CGS39 2.82e-15 2.64e-15 0.00531 0.00398 0.991 Brain_Caudate_basal_ganglia EUR eQTL SPATA33 Skin CGS40 9.94e-05 9.32e-05 0.00523 0.00391 0.991 Brain_Caudate_basal_ganglia EUR eQTL SPIRE2 Skin CGS40 5.32e-07 8.74e-07 0.0335 0.0541 0.912 Brain_Caudate_basal_ganglia EUR eQTL SPIRE2 Skin CGS41 0.0111 0.0182 0.0468 0.076 0.848 Brain_Caudate_basal_ganglia EUR eQTL BET1L Female genital organs CGS46 3.73e-08 5.07e-08 0.1 0.136 0.764 Brain_Caudate_basal_ganglia EUR eQTL STMN3 Female genital organs CGS46 0.000282 0.0332 0.00161 0.188 0.777 Brain_Caudate_basal_ganglia EUR eQTL