Gene_name Class CGID Hypp0 Hypp1 Hypp2 Hypp3 Hypp4 Tissue Population xQTL CDK10 Basal cell carcinoma CGS01 1.76e-09 3.41e-06 5.17e-07 9.26e-09 1 Lung EUR eQTL MYO1F Basal cell carcinoma CGS01 2.73e-06 0.146 9.67e-08 0.00433 0.85 Lung EUR eQTL TRAPPC2L Bone CGS55 0.0713 0.00704 0.0736 0.00642 0.842 Lung EUR eQTL LINC00641 Breast CGS02 0.000132 4.53e-06 0.209 0.00639 0.784 Lung EUR 3'aQTL NSUN4 Breast CGS02 1.21e-08 0.000305 4.64e-06 0.116 0.883 Lung EUR 3'aQTL PDLIM3 Breast CGS02 0.0786 0.00425 0.0745 0.00319 0.839 Lung EUR 3'aQTL TMEM120B Breast CGS02 1.15e-07 0.067 1.19e-08 0.00599 0.927 Lung EUR 3'aQTL ABCC5 Breast CGS02 0.000853 0.0478 0.00208 0.116 0.834 Lung EUR eQTL CBY1 Breast CGS02 4.14e-13 4.73e-09 1.02e-05 0.116 0.884 Lung EUR eQTL CDK2AP1 Breast CGS02 6.7e-14 0.000271 3.23e-11 0.13 0.87 Lung EUR eQTL CHP1 Breast CGS02 2.67e-07 4.17e-06 0.00449 0.0691 0.926 Lung EUR eQTL DDX17 Breast CGS02 1.81e-11 7.13e-10 2.53e-05 0 1 Lung EUR eQTL DET1 Breast CGS02 5.57e-05 1.33e-05 0.0476 0.0104 0.942 Lung EUR eQTL DIDO1 Breast CGS02 1.08e-07 2.56e-06 0.00125 0.0286 0.97 Lung EUR eQTL DYNC1I2 Breast CGS02 2.85e-06 0.000304 0.00035 0.0363 0.963 Lung EUR eQTL FAM227A Breast CGS02 4.74e-12 2.42e-09 0.000117 0.0588 0.941 Lung EUR eQTL HSCB Breast CGS02 0.0948 0.0333 0.0292 0.00944 0.833 Lung EUR eQTL JOSD1 Breast CGS02 7.48e-11 3.92e-09 0.00185 0.0959 0.902 Lung EUR eQTL KRTCAP3 Breast CGS02 1.46e-11 2.47e-11 0.0245 0.0404 0.935 Lung EUR eQTL LHCGR Breast CGS02 0.00244 0.032 0.000577 0.00663 0.958 Lung EUR eQTL LINC00654 Breast CGS02 6.01e-08 0.199 5.06e-10 0.000876 0.8 Lung EUR eQTL MRPS15 Breast CGS02 0.00435 0.00145 0.0624 0.0199 0.912 Lung EUR eQTL MSH6 Breast CGS02 1.28e-09 1.79e-07 6.23e-05 0.00773 0.992 Lung EUR eQTL NBR1 Breast CGS02 1.04e-09 5.71e-07 0.000128 0.0691 0.931 Lung EUR eQTL NBR2 Breast CGS02 6.23e-90 4.23e-07 7.65e-85 0.051 0.949 Lung EUR eQTL NRBP1 Breast CGS02 4.68e-18 1.79e-11 8.2e-09 0.0303 0.97 Lung EUR eQTL PGAP3 Breast CGS02 2.79e-20 4.69e-06 4.15e-17 0.00598 0.994 Lung EUR eQTL PNP Breast CGS02 1.52e-51 9.28e-07 5.62e-48 0.00244 0.998 Lung EUR eQTL POLG Breast CGS02 1.25e-23 7.38e-15 6.23e-11 0.0357 0.964 Lung EUR eQTL PPM1G Breast CGS02 6.9e-12 3.28e-11 0.0121 0.0565 0.931 Lung EUR eQTL PRIM1 Breast CGS02 2.3e-16 4.12e-16 0.000558 1.62e-06 0.999 Lung EUR eQTL PRRG4 Breast CGS02 0.00333 7.15e-05 0.177 0.00299 0.816 Lung EUR eQTL RND2 Breast CGS02 2.86e-17 5.03e-07 3.52e-12 0.0608 0.939 Lung EUR eQTL SLC4A1AP Breast CGS02 6.29e-11 4.01e-11 0.107 0.0675 0.825 Lung EUR eQTL SNX17 Breast CGS02 1.32e-11 1.97e-11 0.0156 0.0224 0.962 Lung EUR eQTL SYCP2L Breast CGS02 1.04e-15 1.14e-15 0.00477 0.00425 0.991 Lung EUR eQTL TMEM106A Breast CGS02 6.07e-10 9.65e-07 7.45e-05 0.118 0.882 Lung EUR eQTL TOMM22 Breast CGS02 2.17e-09 3.03e-09 0.0537 0.0741 0.872 Lung EUR eQTL UIMC1 Breast CGS02 4.94e-32 3.42e-29 1.99e-05 0.0127 0.987 Lung EUR eQTL XBP1 Breast CGS02 3.87e-05 0.00105 0.00472 0.127 0.868 Lung EUR eQTL ZNF98 Breast CGS02 3.38e-05 0.000227 0.0064 0.042 0.951 Lung EUR eQTL ZSCAN5A Breast CGS02 0.000222 4.52e-06 0.127 0.00171 0.871 Lung EUR eQTL BSG Breast CGS02 0.0116 0.000256 0.215 0.00397 0.769 Lung EUR sQTL AMFR Breast CGS03 2.45e-37 0.000999 4.84e-35 0.196 0.803 Lung EUR 3'aQTL MLX Breast CGS03 0.00153 0.00258 0.0145 0.0234 0.958 Lung EUR 3'aQTL NSUN4 Breast CGS03 9.25e-08 0.00971 1.71e-06 0.179 0.811 Lung EUR 3'aQTL WDYHV1 Breast CGS03 4.14e-08 2.28e-08 0.0589 0.0315 0.91 Lung EUR 3'aQTL AP4B1-AS1 Breast CGS03 1.57e-07 5.82e-07 0.0134 0.0488 0.938 Lung EUR eQTL ATG10 Breast CGS03 4.27e-38 2.23e-08 1.61e-31 0.0831 0.917 Lung EUR eQTL B4GAT1 Breast CGS03 9.69e-06 0.0595 2.92e-05 0.178 0.762 Lung EUR eQTL BABAM1 Breast CGS03 1.84e-09 0.000302 6.63e-07 0.108 0.892 Lung EUR eQTL BECN1 Breast CGS03 0.0926 0.0928 0.00262 0.00181 0.81 Lung EUR eQTL CCDC88C Breast CGS03 1.02e-07 5.61e-08 0.0725 0.039 0.889 Lung EUR eQTL CMSS1 Breast CGS03 0.00104 0.000251 0.124 0.029 0.846 Lung EUR eQTL DAP3 Breast CGS03 0.000617 1.27e-05 0.0463 0 0.953 Lung EUR eQTL ELL Breast CGS03 9.47e-25 1.16e-23 0.0042 0.0505 0.945 Lung EUR eQTL GPR68 Breast CGS03 5.41e-07 1.62e-07 0.18 0.0532 0.767 Lung EUR eQTL IRS1 Breast CGS03 0.000173 0.0319 0.000248 0.0449 0.923 Lung EUR eQTL MAP3K1 Breast CGS03 7.88e-55 1.83e-56 0.0412 0 0.959 Lung EUR eQTL MLX Breast CGS03 0.000358 0.00374 0.00661 0.0682 0.921 Lung EUR eQTL ORC2 Breast CGS03 0.0339 0.00112 0.175 0.00499 0.785 Lung EUR eQTL PEX14 Breast CGS03 8.94e-27 2.43e-15 8.78e-13 0.238 0.762 Lung EUR eQTL PLVAP Breast CGS03 0.000236 0.00041 0.0866 0.15 0.763 Lung EUR eQTL SEMA4A Breast CGS03 3.43e-07 0.00801 6.55e-07 0.0143 0.978 Lung EUR eQTL SIVA1 Breast CGS03 2.63e-05 0.000547 0.00257 0.0525 0.944 Lung EUR eQTL SLC6A3 Breast CGS03 2.19e-28 0.0159 3.82e-28 0.0268 0.957 Lung EUR eQTL ZNF14 Breast CGS03 0.0108 0.00118 0.00899 0 0.979 Lung EUR eQTL CCDC91 Breast CGS03 7.54e-07 1.09e-06 0.02 0.0279 0.952 Lung EUR sQTL NEK10 Breast CGS03 1.23e-36 7.67e-38 0.0459 0.0019 0.952 Lung EUR sQTL PTPN23 Breast CGS03 0.000214 3.39e-06 0.0615 3.57e-05 0.938 Lung EUR sQTL MAP3K1 Breast CGS05 0.0384 0.000898 0.0394 0 0.921 Lung EUR eQTL NEK10 Breast CGS05 2e-05 1.25e-06 0.0455 0.00191 0.953 Lung EUR sQTL MAP3K1 Breast CGS08 0.00612 0.000143 0.0408 0 0.953 Lung EUR eQTL NEK10 Breast CGS08 0.0085 0.000533 0.0451 0.00189 0.944 Lung EUR sQTL BMF Female genital organs CGS10 0.000808 0.000122 0.135 0.0196 0.844 Lung EUR eQTL EVI2A Female genital organs CGS10 9.56e-07 0.00214 3.5e-05 0.0774 0.92 Lung EUR eQTL OMG Female genital organs CGS10 4.38e-05 0.0024 0.0016 0.0869 0.909 Lung EUR eQTL DAP3 Gastric CGS13 1.11e-05 2.34e-07 0.0454 0 0.955 Lung EAS eQTL IP6K3 Gastric CGS13 8.92e-10 1e-04 4.14e-07 0.0456 0.954 Lung EAS eQTL LY6K Gastric CGS13 1.04e-47 8.22e-38 1.27e-11 0.0989 0.901 Lung EAS eQTL PSCA Gastric CGS13 7.57e-41 1.1e-37 9.19e-05 0.133 0.867 Lung EAS eQTL THBS3 Gastric CGS13 5.03e-47 1.67e-32 5.93e-18 0.000969 0.999 Lung EAS eQTL TTC33 Gastric CGS13 3.89e-16 7.87e-16 0.000987 0.000998 0.998 Lung EAS eQTL SSBP3-AS1 Liver CGS14 0.00554 0.074 0.000263 0.0026 0.918 Lung EUR eQTL C19orf54 Lung CGS15 5.22e-06 0.0502 9.54e-07 0.00823 0.942 Lung EAS eQTL CYP2A6 Lung CGS15 4.46e-05 3.06e-06 0.0651 0.00353 0.931 Lung EAS eQTL CYP2B7P Lung CGS15 0.0221 0.0166 0.116 0.0866 0.759 Lung EAS eQTL EGLN2 Lung CGS15 0.0519 0.0812 0.0104 0.0155 0.841 Lung EAS eQTL TP63 Lung CGS15 7.68e-08 2.46e-06 0.0024 0.076 0.922 Lung EAS eQTL TPRG1 Lung CGS15 2.23e-05 3.2e-06 0.211 0.0294 0.76 Lung EAS eQTL ABT1 Lung CGS19 1.52e-08 0.000517 4.4e-06 0.149 0.85 Lung EUR eQTL HCG11 Lung CGS19 0.00101 0.0634 0.000201 0.0117 0.924 Lung EUR eQTL HOXB7 Male genital organs CGS29 0.0164 0.0564 0.0218 0.0741 0.831 Lung EUR eQTL PPP1R14A Male genital organs CGS29 1.93e-09 3.94e-09 0.00662 0.0126 0.981 Lung EUR eQTL RGS19 Male genital organs CGS29 0.00629 0.00748 0.0196 0.0223 0.944 Lung EUR eQTL RTEL1 Male genital organs CGS29 0.00176 0.0309 0.00942 0.165 0.793 Lung EUR eQTL SLC25A37 Male genital organs CGS29 0.0782 0.0337 0.0298 0.012 0.846 Lung EUR eQTL YTHDF1 Male genital organs CGS29 0.0369 0.00956 0.111 0.0278 0.815 Lung EUR eQTL CDK10 Melanoma CGS30 9.02e-17 1.75e-13 5.17e-07 9.01e-09 1 Lung EUR eQTL CENPBD1 Melanoma CGS30 1.34e-14 1.65e-14 0.0514 0.0625 0.886 Lung EUR eQTL ST7L Pancreatic CGS34 7.99e-05 0.000132 0.0381 0.0623 0.899 Lung EAS 3'aQTL CAPZA1 Pancreatic CGS34 3.02e-06 0.0753 1.93e-06 0.0471 0.878 Lung EAS eQTL MOV10 Pancreatic CGS34 7.2e-05 0.000127 0.0344 0.0598 0.906 Lung EAS eQTL CRTC2 Prostate CGS35 2.03e-09 2.95e-09 0.0962 0.139 0.764 Lung EUR 3'aQTL GATAD2B Prostate CGS35 0.0389 0.0127 0.0694 0.0218 0.857 Lung EUR 3'aQTL LOC284581 Prostate CGS35 0.00012 4.42e-05 0.142 0.0517 0.806 Lung EUR 3'aQTL NPNT Prostate CGS35 1.81e-11 2.53e-13 0.204 0.00205 0.794 Lung EUR 3'aQTL NSUN4 Prostate CGS35 1.27e-07 0.0132 1.69e-06 0.175 0.811 Lung EUR 3'aQTL ADAMTSL4-AS1 Prostate CGS35 0.000584 0.00126 0.0538 0.115 0.83 Lung EUR eQTL C9orf78 Prostate CGS35 2.82e-08 3.62e-05 9.42e-05 0.12 0.88 Lung EUR eQTL CASP10 Prostate CGS35 0.0462 0.00122 0.0346 0 0.918 Lung EUR eQTL CLK2 Prostate CGS35 0.00895 0.00151 0.0863 0.0136 0.89 Lung EUR eQTL CXCL2 Prostate CGS35 0.000197 2.9e-05 0.19 0.0272 0.782 Lung EUR eQTL PNLDC1 Prostate CGS35 3.09e-14 4.17e-06 5.56e-10 0.0743 0.926 Lung EUR eQTL PPP1R14A Prostate CGS35 4.57e-30 1.09e-29 0.00581 0.0128 0.981 Lung EUR eQTL PTCD3 Prostate CGS35 1.98e-19 5.13e-20 0.153 0.0388 0.809 Lung EUR eQTL RAD9A Prostate CGS35 1.99e-13 0.000627 6.09e-11 0.191 0.808 Lung EUR eQTL SKIL Prostate CGS35 4.99e-30 1.6e-30 0.179 0.0565 0.765 Lung EUR eQTL SLC25A37 Prostate CGS35 5.97e-10 2.43e-10 0.0365 0.0139 0.95 Lung EUR eQTL TNFRSF10B Prostate CGS35 0.00038 3.03e-05 0.226 0.0173 0.756 Lung EUR eQTL TRPM5 Prostate CGS35 3.77e-13 1.12e-13 0.177 0.0519 0.771 Lung EUR eQTL USP20 Prostate CGS35 0.0339 0.000698 0.0447 0 0.921 Lung EUR eQTL ZBTB7B Prostate CGS35 3.32e-10 4.17e-10 0.0458 0.0567 0.897 Lung EUR eQTL MIA Prostate CGS35 0.00618 0.000171 0.068 0.00095 0.925 Lung EUR sQTL SLC22A3 Prostate CGS35 2.47e-16 4.43e-16 0.0659 0.117 0.817 Lung EUR sQTL ZBTB4 Prostate CGS35 0.00013 0.00897 1.44e-05 1.02e-06 0.991 Lung EUR sQTL ZNF570 Prostate CGS35 0.0233 0.0695 0.000305 0 0.907 Lung EUR sQTL FOXP4 Prostate CGS36 1.31e-06 5.76e-06 0.023 0.1 0.877 Lung EAS 3'aQTL LDAH Prostate CGS36 3.69e-18 0.000292 3.29e-16 0.0251 0.975 Lung EAS eQTL TMEM17 Prostate CGS36 8.71e-09 1.78e-05 4.89e-07 2.76e-08 1 Lung EAS eQTL HOXB7 Prostate CGS37 0.0197 0.0678 0.0207 0.0704 0.821 Lung EUR eQTL PPP1R14A Prostate CGS37 1.05e-10 2.15e-10 0.00663 0.0126 0.981 Lung EUR eQTL RGS19 Prostate CGS37 0.000988 0.00118 0.0206 0.0235 0.954 Lung EUR eQTL SLC25A37 Prostate CGS37 0.027 0.0116 0.0325 0.0131 0.916 Lung EUR eQTL YTHDF1 Prostate CGS37 0.0136 0.00352 0.0926 0.0231 0.867 Lung EUR eQTL CDK10 Skin CGS38 1.54e-05 0.0297 5.02e-07 9.51e-08 0.97 Lung EUR eQTL ZBTB10 Skin CGS39 0.023 5e-04 0.0429 0 0.934 Lung EUR 3'aQTL ARNT Skin CGS39 1.53e-06 0.00107 0.000171 0.118 0.88 Lung EUR eQTL CDK10 Skin CGS39 5.9e-36 7.55e-33 7.81e-07 0 1 Lung EUR eQTL CTSC Skin CGS39 0.00139 0.00581 0.00784 0.0319 0.953 Lung EUR eQTL HERC2P9 Skin CGS39 2.14e-22 1.9e-12 3.44e-12 0.0297 0.97 Lung EUR eQTL LINGO4 Skin CGS39 3.62e-06 0.00102 2.21e-05 0.00522 0.994 Lung EUR eQTL SPAG1 Skin CGS39 7.01e-06 2.57e-05 0.0309 0.112 0.857 Lung EUR sQTL CDK10 Skin CGS40 1.39e-13 1.76e-10 7.89e-07 0 1 Lung EUR eQTL HERC2P9 Skin CGS40 5.13e-12 0.0429 5.96e-12 0.0489 0.908 Lung EUR eQTL CDK10 Skin CGS41 2.51e-09 3.18e-06 7.9e-07 0 1 Lung EUR eQTL B4GALNT4 Female genital organs CGS46 0.0586 0.00813 0.137 0.0183 0.778 Lung EUR eQTL C20orf204 Female genital organs CGS46 0.00969 0.0319 0.014 0.045 0.899 Lung EUR eQTL STN1 Female genital organs CGS46 1.42e-06 4.01e-07 0.0552 0.0147 0.93 Lung EUR eQTL