Gene_name Class CGID Hypp0 Hypp1 Hypp2 Hypp3 Hypp4 Tissue Population xQTL FANCA Basal cell carcinoma CGS01 1.92e-09 7.33e-10 0.0236 0.00807 0.968 Small_Intestine_Terminal_Ileum EUR eQTL OSGEP Breast CGS02 1.37e-24 0.00264 1.71e-24 0.0023 0.995 Small_Intestine_Terminal_Ileum EUR 3'aQTL ZNF579 Breast CGS02 7.89e-06 1.25e-07 0.246 0.00313 0.751 Small_Intestine_Terminal_Ileum EUR 3'aQTL APTX Breast CGS02 0.000211 0.00134 0.0257 0.163 0.81 Small_Intestine_Terminal_Ileum EUR eQTL CAD Breast CGS02 5.71e-11 2.67e-11 0.0987 0.0453 0.856 Small_Intestine_Terminal_Ileum EUR eQTL CDK2AP1 Breast CGS02 4.76e-07 0.000131 0.000226 0.0612 0.938 Small_Intestine_Terminal_Ileum EUR eQTL DYNC1I2 Breast CGS02 8.91e-05 0.000313 0.0109 0.0374 0.951 Small_Intestine_Terminal_Ileum EUR eQTL FAM227A Breast CGS02 1.83e-09 3.56e-09 0.0452 0.0872 0.868 Small_Intestine_Terminal_Ileum EUR eQTL FOXN2 Breast CGS02 0.00575 0.0196 0.00206 0.00607 0.966 Small_Intestine_Terminal_Ileum EUR eQTL GTF2A1L Breast CGS02 2.37e-21 0.0262 4.57e-21 0.0496 0.924 Small_Intestine_Terminal_Ileum EUR eQTL HELB Breast CGS02 8.46e-07 0.0739 4.63e-07 0.0395 0.887 Small_Intestine_Terminal_Ileum EUR eQTL MCM8 Breast CGS02 7.53e-06 2.99e-06 0.0792 0.0306 0.89 Small_Intestine_Terminal_Ileum EUR eQTL MORN3 Breast CGS02 0.0442 0.0675 0.0111 0.0161 0.861 Small_Intestine_Terminal_Ileum EUR eQTL NBR2 Breast CGS02 3.07e-21 4.64e-07 3.76e-16 0.056 0.944 Small_Intestine_Terminal_Ileum EUR eQTL NRBP1 Breast CGS02 2.65e-12 2.84e-11 0.00464 0.0488 0.947 Small_Intestine_Terminal_Ileum EUR eQTL OSGEP Breast CGS02 0.000968 0.1 0.000131 0.0127 0.886 Small_Intestine_Terminal_Ileum EUR eQTL PGAP3 Breast CGS02 2.42e-08 6.21e-06 3.59e-05 0.00823 0.992 Small_Intestine_Terminal_Ileum EUR eQTL PNP Breast CGS02 1.04e-06 1.08e-06 0.00385 0.00299 0.993 Small_Intestine_Terminal_Ileum EUR eQTL POLG Breast CGS02 5.95e-14 5.27e-15 0.0872 0.00681 0.906 Small_Intestine_Terminal_Ileum EUR eQTL PRIM1 Breast CGS02 3.55e-14 7.03e-16 0.0861 0.000794 0.913 Small_Intestine_Terminal_Ileum EUR eQTL SLC5A6 Breast CGS02 0.000563 5.57e-05 0.197 0.0187 0.784 Small_Intestine_Terminal_Ileum EUR eQTL STON1-GTF2A1L Breast CGS02 7.47e-09 0.0266 1.05e-08 0.0366 0.937 Small_Intestine_Terminal_Ileum EUR eQTL SYCP2L Breast CGS02 8.67e-19 3.06e-15 3.99e-06 0.0131 0.987 Small_Intestine_Terminal_Ileum EUR eQTL TDRD3 Breast CGS02 7.47e-11 2.21e-11 0.187 0.0546 0.759 Small_Intestine_Terminal_Ileum EUR eQTL UIMC1 Breast CGS02 3.76e-28 4.92e-29 0.151 0.019 0.83 Small_Intestine_Terminal_Ileum EUR eQTL FNDC4 Breast CGS02 2.15e-11 2.69e-11 0.0375 0.0461 0.916 Small_Intestine_Terminal_Ileum EUR sQTL AMFR Breast CGS03 3.61e-07 0.000628 7.11e-05 0.123 0.876 Small_Intestine_Terminal_Ileum EUR 3'aQTL IRF1 Breast CGS03 3.07e-05 0.00162 0.00216 0.113 0.883 Small_Intestine_Terminal_Ileum EUR 3'aQTL POLR2J Breast CGS03 0.00019 0.00634 0.000792 0.0255 0.967 Small_Intestine_Terminal_Ileum EUR 3'aQTL SGSM3 Breast CGS03 6.89e-14 2.37e-14 0.0608 0.02 0.919 Small_Intestine_Terminal_Ileum EUR 3'aQTL ADCY3 Breast CGS03 5.62e-08 2e-07 0.0132 0.046 0.941 Small_Intestine_Terminal_Ileum EUR eQTL APOBEC3B Breast CGS03 7.58e-07 5.31e-07 0.0858 0.0592 0.855 Small_Intestine_Terminal_Ileum EUR eQTL ATG10 Breast CGS03 1.28e-11 2.56e-08 5.76e-05 0.114 0.886 Small_Intestine_Terminal_Ileum EUR eQTL CTSF Breast CGS03 0.000358 0.0252 0.000566 0.0389 0.935 Small_Intestine_Terminal_Ileum EUR eQTL FADD Breast CGS03 4.09e-43 3.42e-44 0.217 0.0173 0.766 Small_Intestine_Terminal_Ileum EUR eQTL FES Breast CGS03 0.0309 0.00968 0.0749 0.0226 0.862 Small_Intestine_Terminal_Ileum EUR eQTL LINC-PINT Breast CGS03 0.00218 5.83e-05 0.161 0.00348 0.833 Small_Intestine_Terminal_Ileum EUR eQTL LRRC25 Breast CGS03 1.33e-23 1.84e-23 0.082 0.113 0.805 Small_Intestine_Terminal_Ileum EUR eQTL MAST2 Breast CGS03 4.06e-05 0.00105 0.00841 0.218 0.773 Small_Intestine_Terminal_Ileum EUR eQTL NAGLU Breast CGS03 0.0123 0.00362 0.137 0.0397 0.808 Small_Intestine_Terminal_Ileum EUR eQTL POLR2J2 Breast CGS03 0.0162 0.0208 0.0257 0.032 0.905 Small_Intestine_Terminal_Ileum EUR eQTL PPA2 Breast CGS03 1.7e-06 4.27e-07 0.0965 0.0234 0.88 Small_Intestine_Terminal_Ileum EUR eQTL RIN3 Breast CGS03 1.68e-09 1.24e-08 0.00566 0.0408 0.954 Small_Intestine_Terminal_Ileum EUR eQTL RPS23 Breast CGS03 4.97e-10 3.16e-08 0.00224 0.142 0.856 Small_Intestine_Terminal_Ileum EUR eQTL SIVA1 Breast CGS03 0.000535 0.000229 0.0535 0.022 0.924 Small_Intestine_Terminal_Ileum EUR eQTL SLC22A5 Breast CGS03 0.000604 0.00158 0.0495 0.128 0.82 Small_Intestine_Terminal_Ileum EUR eQTL SPTBN2 Breast CGS03 0.000157 0.0373 0.000256 0.0598 0.902 Small_Intestine_Terminal_Ileum EUR eQTL DAP3 Breast CGS03 0.00479 9.09e-05 0.118 0.00136 0.876 Small_Intestine_Terminal_Ileum EUR sQTL APOBEC3B Breast CGS05 0.000584 0.000413 0.061 0.0422 0.896 Small_Intestine_Terminal_Ileum EUR eQTL FADD Breast CGS05 1.75e-08 1.54e-09 0.222 0.0188 0.759 Small_Intestine_Terminal_Ileum EUR eQTL FADD Breast CGS08 1.37e-08 1.21e-09 0.221 0.0187 0.76 Small_Intestine_Terminal_Ileum EUR eQTL EIF2AK4 Female genital organs CGS10 5.33e-07 9.43e-05 0.000235 0.0407 0.959 Small_Intestine_Terminal_Ileum EUR eQTL SNX11 Female genital organs CGS10 8.89e-05 2.75e-05 0.106 0.0319 0.862 Small_Intestine_Terminal_Ileum EUR sQTL CARD6 Gastric CGS13 5.75e-15 1.93e-15 0.145 0.048 0.807 Small_Intestine_Terminal_Ileum EAS eQTL LY6E Gastric CGS13 3.17e-15 5.28e-16 0.162 0.0262 0.811 Small_Intestine_Terminal_Ileum EAS eQTL THBS3 Gastric CGS13 4.3e-32 6.07e-32 0.00507 0.00617 0.989 Small_Intestine_Terminal_Ileum EAS eQTL DCBLD1 Lung CGS15 6.9e-10 2.16e-07 0.000415 0.129 0.871 Small_Intestine_Terminal_Ileum EAS eQTL HMGN4 Lung CGS19 0.000163 0.0618 0.000107 0.0395 0.898 Small_Intestine_Terminal_Ileum EUR eQTL FADD Breast CGS21 1.89e-06 1.66e-07 0.223 0.0189 0.758 Small_Intestine_Terminal_Ileum EUR eQTL PPP1R14A Male genital organs CGS29 2e-09 2.83e-09 0.00687 0.00872 0.984 Small_Intestine_Terminal_Ileum EUR eQTL CDK10 Melanoma CGS30 0.0136 0.00873 0.00152 0 0.976 Small_Intestine_Terminal_Ileum EUR eQTL CENPBD1 Melanoma CGS30 5.89e-15 2.22e-15 0.0224 0.00746 0.97 Small_Intestine_Terminal_Ileum EUR eQTL FANCA Melanoma CGS30 3.46e-20 1.33e-20 0.0222 0.0075 0.97 Small_Intestine_Terminal_Ileum EUR eQTL CDK10 Melanoma CGS30 5.61e-05 0.013 4.25e-06 0 0.987 Small_Intestine_Terminal_Ileum EUR sQTL ATP8B2 Prostate CGS35 0.00861 0.000377 0.089 0.00299 0.899 Small_Intestine_Terminal_Ileum EUR 3'aQTL B3GAT1 Prostate CGS35 0.00019 4e-04 0.0345 0.0719 0.893 Small_Intestine_Terminal_Ileum EUR eQTL GGCX Prostate CGS35 1.85e-21 3.83e-20 0.00143 0.0286 0.97 Small_Intestine_Terminal_Ileum EUR eQTL PCAT19 Prostate CGS35 4.37e-22 1.34e-19 0.000108 0.0322 0.968 Small_Intestine_Terminal_Ileum EUR eQTL PPP1R14A Prostate CGS35 5e-30 8.36e-30 0.00636 0.00965 0.984 Small_Intestine_Terminal_Ileum EUR eQTL TMEM91 Prostate CGS35 0.0263 0.0372 0.000665 3.52e-06 0.936 Small_Intestine_Terminal_Ileum EUR eQTL TOR1B Prostate CGS35 8.5e-06 2.83e-05 0.0284 0.0935 0.878 Small_Intestine_Terminal_Ileum EUR eQTL ZNF571 Prostate CGS35 0.127 0.0467 0.018 0.00583 0.803 Small_Intestine_Terminal_Ileum EUR eQTL SLC39A13 Prostate CGS35 2.06e-05 0.00339 1.92e-05 0.00217 0.994 Small_Intestine_Terminal_Ileum EUR sQTL USP20 Prostate CGS35 0.0693 0.000427 0.13 0 0.8 Small_Intestine_Terminal_Ileum EUR sQTL LDAH Prostate CGS36 1.55e-08 0.000293 1.38e-06 0.0252 0.975 Small_Intestine_Terminal_Ileum EAS eQTL PLEKHH2 Prostate CGS36 1.28e-05 7.47e-06 0.134 0.0778 0.788 Small_Intestine_Terminal_Ileum EAS eQTL SLC12A7 Prostate CGS36 0.000335 1.15e-05 0.187 0.00561 0.807 Small_Intestine_Terminal_Ileum EAS eQTL GTPBP1 Prostate CGS36 0.00641 0.000895 0.205 0.0278 0.76 Small_Intestine_Terminal_Ileum EAS sQTL PPP1R14A Prostate CGS37 1.08e-10 1.52e-10 0.00682 0.00865 0.985 Small_Intestine_Terminal_Ileum EUR eQTL CENPBD1 Skin CGS38 0.0861 0.0325 0.0888 0.0327 0.76 Small_Intestine_Terminal_Ileum EUR eQTL DBNDD1 Skin CGS38 5.1e-09 7.88e-07 0.00117 0.18 0.819 Small_Intestine_Terminal_Ileum EUR eQTL CDK10 Skin CGS39 5.59e-14 3.5e-14 0.0016 0 0.998 Small_Intestine_Terminal_Ileum EUR eQTL FANCA Skin CGS39 1.28e-17 3.9e-18 0.0373 0.0105 0.952 Small_Intestine_Terminal_Ileum EUR eQTL HERC2P9 Skin CGS39 1.57e-13 2.6e-12 0.00177 0.0285 0.97 Small_Intestine_Terminal_Ileum EUR eQTL CDK10 Skin CGS39 4.36e-17 8.54e-15 5.1e-06 0 1 Small_Intestine_Terminal_Ileum EUR sQTL CDK10 Skin CGS40 0.000711 0.000446 0.00159 0 0.997 Small_Intestine_Terminal_Ileum EUR eQTL FANCA Skin CGS40 1.1e-05 3.35e-06 0.0384 0.0107 0.951 Small_Intestine_Terminal_Ileum EUR eQTL HERC2P9 Skin CGS40 0.00307 0.0491 0.0022 0.0343 0.911 Small_Intestine_Terminal_Ileum EUR eQTL CDK10 Skin CGS40 7.2e-07 0.000142 5.07e-06 0 1 Small_Intestine_Terminal_Ileum EUR sQTL CENPBD1 Skin CGS41 0.000151 3.74e-05 0.148 0.0358 0.816 Small_Intestine_Terminal_Ileum EUR eQTL CCDC180 Thyroid CGS45 5.21e-08 4.25e-10 0.109 0 0.891 Small_Intestine_Terminal_Ileum EUR sQTL