Gene_name Class CGID Hypp0 Hypp1 Hypp2 Hypp3 Hypp4 Tissue Population xQTL SPATA33 Basal cell carcinoma CGS01 1.28e-12 2.78e-13 0.167 0.0355 0.797 Testis EUR eQTL BCAR3 Bone CGS55 0.012 0.0166 0.0273 0.0369 0.907 Testis EUR eQTL SKA1 Bone CGS55 7.31e-09 0.1 1.07e-09 0.0138 0.886 Testis EUR eQTL DENR Breast CGS02 0.000594 4.65e-06 0.223 0.000969 0.776 Testis EUR 3'aQTL EPS8L1 Breast CGS02 0.123 0.0016 0.0953 0.000464 0.78 Testis EUR 3'aQTL KDELR3 Breast CGS02 5.48e-09 3.21e-09 0.134 0.0778 0.788 Testis EUR 3'aQTL OIP5-AS1 Breast CGS02 0.000106 0.000238 0.0191 0.0421 0.938 Testis EUR 3'aQTL OSGEP Breast CGS02 1.46e-54 0.00273 1.82e-54 0.0024 0.995 Testis EUR 3'aQTL TMEM120B Breast CGS02 0.00212 0.125 0.000225 0.0124 0.861 Testis EUR 3'aQTL ACSL1 Breast CGS02 1.35e-16 1.24e-09 6.36e-09 0.0576 0.942 Testis EUR eQTL ARL14EP Breast CGS02 8.26e-24 1.26e-08 8.65e-17 0.131 0.869 Testis EUR eQTL BABAM2 Breast CGS02 0.0119 0.00827 0.0635 0.0432 0.873 Testis EUR eQTL C16orf72 Breast CGS02 0.00162 0.000206 0.0778 0.00894 0.911 Testis EUR eQTL CBY1 Breast CGS02 3.35e-10 3.54e-09 0.00829 0.0866 0.905 Testis EUR eQTL CHEK2 Breast CGS02 1.49e-17 0.000121 3.03e-15 0.0237 0.976 Testis EUR eQTL DDX17 Breast CGS02 7.18e-10 3.24e-09 0.00252 0.0104 0.987 Testis EUR eQTL DIDO1 Breast CGS02 2.31e-08 7.06e-07 0.000267 0.00716 0.993 Testis EUR eQTL DNAJA1 Breast CGS02 9.07e-07 0.000123 0.00011 0.0139 0.986 Testis EUR eQTL DYNC1I2 Breast CGS02 1.32e-08 0.000403 1.62e-06 0.0485 0.951 Testis EUR eQTL EXD1 Breast CGS02 6.65e-07 7.18e-06 0.00298 0.0312 0.966 Testis EUR eQTL EXO1 Breast CGS02 4.45e-25 1.55e-09 8.9e-18 0.03 0.97 Testis EUR eQTL FAAH Breast CGS02 2.7e-11 9.32e-05 1.04e-08 0.0349 0.965 Testis EUR eQTL FAM227A Breast CGS02 1.02e-13 3.82e-09 2.52e-06 0.0935 0.907 Testis EUR eQTL FAM71E2 Breast CGS02 4.29e-06 0.000529 4.91e-05 0.00505 0.994 Testis EUR eQTL FANCI Breast CGS02 3.11e-16 8.13e-15 0.0029 0.0749 0.922 Testis EUR eQTL FGFR4 Breast CGS02 1.08e-28 5.19e-29 0.0432 0.0199 0.937 Testis EUR eQTL GDI2 Breast CGS02 2.14e-07 0.00238 8.9e-06 0.0981 0.9 Testis EUR eQTL GTPBP1 Breast CGS02 4.89e-25 4.45e-09 1.21e-17 0.109 0.891 Testis EUR eQTL HELB Breast CGS02 2.67e-30 0.0528 3.03e-30 0.0591 0.888 Testis EUR eQTL HELQ Breast CGS02 7.18e-31 1.96e-18 3.22e-15 0.00779 0.992 Testis EUR eQTL KDELR3 Breast CGS02 6.23e-11 3.95e-09 0.00154 0.0968 0.902 Testis EUR eQTL LINC01859 Breast CGS02 7.08e-33 0.00522 1.51e-31 0.11 0.884 Testis EUR eQTL MIR3945HG Breast CGS02 2.51e-17 7.53e-10 1.19e-09 0.0346 0.965 Testis EUR eQTL MORN3 Breast CGS02 0.00243 0.083 0.000911 0.0302 0.883 Testis EUR eQTL NBR2 Breast CGS02 2.27e-59 3.73e-07 2.79e-54 0.0449 0.955 Testis EUR eQTL NEURL1B Breast CGS02 6.94e-05 0.00033 0.00277 0.0122 0.985 Testis EUR eQTL NLRP11 Breast CGS02 0.0209 0.002 0.0855 0.00733 0.884 Testis EUR eQTL NRBP1 Breast CGS02 2.75e-15 2.47e-11 4.81e-06 0.0423 0.958 Testis EUR eQTL NSUN4 Breast CGS02 8.19e-29 0.000322 3.15e-26 0.123 0.877 Testis EUR eQTL NUSAP1 Breast CGS02 0.000402 0.000274 0.0452 0.0299 0.924 Testis EUR eQTL PIWIL1 Breast CGS02 1.54e-13 1.17e-06 3.68e-09 0.027 0.973 Testis EUR eQTL PNP Breast CGS02 6.45e-05 1.54e-06 0.238 0.00493 0.757 Testis EUR eQTL POLG Breast CGS02 9.83e-15 6.58e-15 0.0444 0.0288 0.927 Testis EUR eQTL PPM1G Breast CGS02 6.13e-11 3.69e-11 0.107 0.0637 0.829 Testis EUR eQTL PPP1R21 Breast CGS02 0.000315 0.0982 5.53e-05 0.0163 0.885 Testis EUR eQTL PPP6R1 Breast CGS02 8.65e-05 3.48e-06 0.0494 0.00104 0.95 Testis EUR eQTL PSMD3 Breast CGS02 3.23e-05 9.43e-05 0.048 0.139 0.813 Testis EUR eQTL RAD54L Breast CGS02 3.21e-05 0.000214 0.00583 0.0379 0.956 Testis EUR eQTL REV3L Breast CGS02 0.00027 0.000155 0.0533 0.0296 0.917 Testis EUR eQTL RND2 Breast CGS02 1.21e-12 4.63e-07 1.49e-07 0.0559 0.944 Testis EUR eQTL SLC25A12 Breast CGS02 4.09e-05 0.000236 0.000394 0.00128 0.998 Testis EUR eQTL SLC34A1 Breast CGS02 4.63e-28 5.38e-29 0.186 0.0208 0.794 Testis EUR eQTL TDRD3 Breast CGS02 6.43e-06 8.4e-05 0.00419 0.0538 0.942 Testis EUR eQTL TRIM54 Breast CGS02 9.9e-11 3.33e-10 0.00983 0.0321 0.958 Testis EUR eQTL TTC28 Breast CGS02 7.5e-08 0.00217 2.35e-06 0.0673 0.931 Testis EUR eQTL UIMC1 Breast CGS02 1.56e-46 3.36e-29 6.28e-20 0.0125 0.987 Testis EUR eQTL ZNF728 Breast CGS02 1.64e-13 0.00568 1.5e-12 0.0511 0.943 Testis EUR eQTL LINC02069 Breast CGS02 0.00027 1.59e-05 0.171 0.0092 0.82 Testis EUR sQTL POLG Breast CGS02 1.11e-14 1.77e-14 0.0419 0.0658 0.892 Testis EUR sQTL RNF44 Breast CGS02 1.96e-06 4.03e-08 0.0534 0.000153 0.946 Testis EUR sQTL AMFR Breast CGS03 2.57e-10 0.000519 5.07e-08 0.102 0.898 Testis EUR 3'aQTL ARRDC3-AS1 Breast CGS03 3.87e-08 1.15e-07 0.0244 0.0719 0.904 Testis EUR 3'aQTL ATG10 Breast CGS03 0.0197 0.0019 0.0258 0.00153 0.951 Testis EUR 3'aQTL NEK10 Breast CGS03 1.27e-29 1.79e-31 0.0665 0 0.934 Testis EUR 3'aQTL RASA4 Breast CGS03 0.00362 0.00348 0.0407 0.0382 0.914 Testis EUR 3'aQTL RNH1 Breast CGS03 3.63e-05 9.69e-07 0.222 0.00516 0.773 Testis EUR 3'aQTL ANKLE1 Breast CGS03 4.1e-12 0.000342 1.51e-09 0.125 0.874 Testis EUR eQTL ANXA13 Breast CGS03 5.09e-17 7.63e-08 7.23e-11 0.108 0.892 Testis EUR eQTL APOBEC3A Breast CGS03 2.6e-06 9.78e-08 0.215 0.00733 0.777 Testis EUR eQTL APOBEC3B Breast CGS03 3.25e-13 1.22e-08 2.7e-08 1.29e-05 1 Testis EUR eQTL ATG10 Breast CGS03 2.34e-49 2.23e-08 1.05e-42 0.0993 0.901 Testis EUR eQTL BAIAP2L2 Breast CGS03 9.75e-07 3.35e-06 0.0476 0.163 0.789 Testis EUR eQTL BCAS4 Breast CGS03 2.09e-06 0.00532 4.49e-06 0.0104 0.984 Testis EUR eQTL CBX8 Breast CGS03 0.00319 0.00119 0.0884 0.0322 0.875 Testis EUR eQTL CD160 Breast CGS03 1.39e-05 0.0798 1.6e-07 0 0.92 Testis EUR eQTL CMSS1 Breast CGS03 4.79e-07 4.55e-06 0.0119 0.112 0.876 Testis EUR eQTL DTNBP1 Breast CGS03 0.00446 0.00201 0.0977 0.0431 0.853 Testis EUR eQTL EMBP1 Breast CGS03 7.61e-44 4.78e-44 0.151 0.0944 0.754 Testis EUR eQTL FAM126B Breast CGS03 0.00049 5.19e-05 0.12 0.0118 0.868 Testis EUR eQTL FBXL13 Breast CGS03 0.00149 0.0129 0.0168 0.145 0.824 Testis EUR eQTL HELQ Breast CGS03 1.53e-18 1.99e-05 4.73e-15 0.0604 0.94 Testis EUR eQTL INHBB Breast CGS03 4.38e-08 1.09e-07 0.00882 0.021 0.97 Testis EUR eQTL LZIC Breast CGS03 2.41e-06 1.55e-06 0.0684 0.0431 0.888 Testis EUR eQTL MAP3K1 Breast CGS03 2.54e-49 4.13e-51 0.0578 0 0.942 Testis EUR eQTL MYL3 Breast CGS03 0.116 0.00257 0.0458 0.000176 0.835 Testis EUR eQTL NEK10 Breast CGS03 1.55e-08 0.000463 6.87e-07 0.0196 0.98 Testis EUR eQTL OVOL1 Breast CGS03 1.78e-05 6.52e-06 0.0288 0.00962 0.962 Testis EUR eQTL PIK3R3 Breast CGS03 2.65e-09 0.00106 5.85e-07 0.233 0.766 Testis EUR eQTL POLR2J3 Breast CGS03 0.069 0.00224 0.0537 0.000874 0.874 Testis EUR eQTL RAD54L Breast CGS03 0.000445 0.0107 0.0074 0.177 0.805 Testis EUR eQTL RALB Breast CGS03 1.12e-49 0.00482 1.68e-48 0.0714 0.924 Testis EUR eQTL RPS23 Breast CGS03 7.79e-28 1.67e-07 2.73e-22 0.0574 0.943 Testis EUR eQTL SEMA4A Breast CGS03 4.99e-08 0.0106 3.74e-07 0.0786 0.911 Testis EUR eQTL SGCE Breast CGS03 2.48e-09 7.24e-09 0.0201 0.0577 0.922 Testis EUR eQTL SYCE2 Breast CGS03 0.00938 0.0184 0.0179 0.0342 0.92 Testis EUR eQTL TRIP13 Breast CGS03 0.0854 0.0168 0.0727 0.0135 0.812 Testis EUR eQTL ZBTB2 Breast CGS03 0.0194 0.00614 0.0669 0.0202 0.887 Testis EUR eQTL ZBTB38 Breast CGS03 1.99e-12 5.58e-10 0.000336 0.0933 0.906 Testis EUR eQTL ZNF230 Breast CGS03 3.12e-10 1.39e-10 0.0521 0.0222 0.926 Testis EUR eQTL ARHGEF2 Breast CGS03 0.00622 0.000198 0.0616 0.00103 0.931 Testis EUR sQTL BCL2L11 Breast CGS03 0.0029 4.89e-05 0.0557 0 0.941 Testis EUR sQTL DNAJC27 Breast CGS03 2.09e-05 4.96e-06 0.0469 0.0102 0.943 Testis EUR sQTL GRAP2 Breast CGS03 1.01e-18 7.22e-21 0.123 0 0.877 Testis EUR sQTL MUC1 Breast CGS03 3.36e-07 0.00241 1.39e-07 0 0.998 Testis EUR sQTL NEK10 Breast CGS03 1.78e-38 6.79e-38 0.0137 0.0514 0.935 Testis EUR sQTL POLR2J3 Breast CGS03 0.00678 0.00838 0.0152 0.0179 0.952 Testis EUR sQTL ZNF283 Breast CGS03 0.0011 0.00566 0.00635 0.0316 0.955 Testis EUR sQTL CLIC6 Breast CGS04 0.00225 0.000398 0.198 0.0343 0.765 Testis EAS eQTL LINC01426 Breast CGS04 0.0757 0.13 0.00788 0.0128 0.774 Testis EAS eQTL NEK10 Breast CGS05 0.000271 3.68e-06 0.0684 0 0.931 Testis EUR 3'aQTL APOBEC3A Breast CGS05 0.00199 7.16e-05 0.206 0.00663 0.785 Testis EUR eQTL APOBEC3B Breast CGS05 1.96e-10 9.65e-06 2.04e-08 7.48e-06 1 Testis EUR eQTL MAP3K1 Breast CGS05 0.179 0.0029 0.0476 0 0.77 Testis EUR eQTL NEK10 Breast CGS05 2.6e-08 1.06e-07 0.0128 0.0515 0.936 Testis EUR sQTL C5orf66 Colorectal CGS07 2.13e-07 1.93e-08 0.142 0.012 0.846 Testis EAS eQTL NEK10 Breast CGS08 0.0718 0.000976 0.0635 0 0.864 Testis EUR 3'aQTL MAP3K1 Breast CGS08 0.0577 0.000933 0.0548 0 0.887 Testis EUR eQTL MRPL23-AS1 Breast CGS08 2.12e-09 0.0179 2.68e-08 0.227 0.755 Testis EUR eQTL NEK10 Breast CGS08 1.15e-05 4.69e-05 0.0128 0.0515 0.936 Testis EUR sQTL EIF2AK4 Female genital organs CGS10 7.36e-05 7e-05 0.0258 0.0236 0.95 Testis EUR eQTL NF1 Female genital organs CGS10 1.02e-06 0.00336 3.72e-05 0.122 0.875 Testis EUR eQTL SNX11 Female genital organs CGS10 0.000127 0.03 6.44e-06 0.000557 0.969 Testis EUR eQTL BAK1 Gastric CGS13 0.00217 0.00472 0.00192 0.0032 0.988 Testis EAS eQTL GBA Gastric CGS13 9.22e-31 1.89e-30 0.0765 0.156 0.767 Testis EAS eQTL LINC01016 Gastric CGS13 0.00017 0.0129 0.000741 0.0553 0.931 Testis EAS eQTL PSCA Gastric CGS13 3.32e-42 1.62e-37 1.59e-06 0.0766 0.923 Testis EAS eQTL SLURP1 Gastric CGS13 0.096 0.0343 0.081 0.0282 0.761 Testis EAS eQTL THBS3 Gastric CGS13 6e-40 1.75e-32 7.08e-11 0.00106 0.999 Testis EAS eQTL ARHGEF2 Gastric CGS13 5.14e-08 1.34e-09 0.0711 0.00093 0.928 Testis EAS sQTL MUC1 Gastric CGS13 1.41e-12 9.82e-09 1.44e-07 0 1 Testis EAS sQTL LINC02431 Liver CGS14 1.38e-14 0.00755 7.6e-14 0.0407 0.952 Testis EUR 3'aQTL ABT1 Lung CGS19 2.67e-05 0.000306 0.00769 0.0872 0.905 Testis EUR eQTL GGNBP1 Lung CGS19 0.00239 5.5e-05 0.232 0.00458 0.761 Testis EUR eQTL RASGRF1 Lung CGS24 0.00341 5.02e-05 0.152 0.0014 0.843 Testis EUR eQTL RYR1 Male genital organs CGS29 6.31e-08 2.93e-09 0.217 0.00928 0.774 Testis EUR 3'aQTL SLC25A37 Male genital organs CGS29 0.0143 0.16 0.000685 0.00685 0.818 Testis EUR 3'aQTL LKAAEAR1 Male genital organs CGS29 2.35e-10 0.00873 7.22e-10 0.0259 0.965 Testis EUR eQTL TCEA2 Male genital organs CGS29 1.58e-05 0.00275 8.16e-05 0.0132 0.984 Testis EUR eQTL SPATA33 Melanoma CGS30 5.91e-22 1.28e-22 0.171 0.0362 0.793 Testis EUR eQTL SPATA33 Melanoma CGS30 0.000416 2.19e-06 0.159 0 0.84 Testis EUR sQTL PLBD1 Ovarian CGS33 0.00758 0.143 0.000393 0.00658 0.842 Testis EUR eQTL ST7L Pancreatic CGS34 1.65e-05 8.73e-05 0.00784 0.0406 0.951 Testis EAS 3'aQTL CHRNB1 Prostate CGS35 1.41e-10 0.014 2.05e-10 0.0194 0.967 Testis EUR 3'aQTL RYR1 Prostate CGS35 1.66e-28 8.52e-30 0.211 0.0101 0.779 Testis EUR 3'aQTL SLC25A37 Prostate CGS35 6.36e-12 6.98e-11 0.00163 0.0169 0.981 Testis EUR 3'aQTL SUPT4H1 Prostate CGS35 0.000169 0.0144 0.00229 0.195 0.788 Testis EUR 3'aQTL ZNF571 Prostate CGS35 2.86e-06 3.73e-08 0.0712 0 0.929 Testis EUR 3'aQTL ARNT Prostate CGS35 0.00767 0.0301 0.00939 0.0359 0.917 Testis EUR eQTL COMMD7 Prostate CGS35 6.04e-07 0.0032 3.43e-05 0.181 0.816 Testis EUR eQTL GGCX Prostate CGS35 2.95e-47 4.52e-20 2.27e-29 0.0339 0.966 Testis EUR eQTL INCENP Prostate CGS35 0.000158 2.13e-05 0.184 0.024 0.792 Testis EUR eQTL POLI Prostate CGS35 2.07e-26 0.00129 1.09e-24 0.0673 0.931 Testis EUR eQTL RAD54L Prostate CGS35 0.000589 0.014 0.00736 0.174 0.804 Testis EUR eQTL RAD9A Prostate CGS35 9.74e-19 0.000673 2.98e-16 0.205 0.794 Testis EUR eQTL SLC41A1 Prostate CGS35 1.12e-08 2.17e-05 1.44e-05 0.0268 0.973 Testis EUR eQTL TECPR1 Prostate CGS35 2.79e-06 3.39e-06 0.0257 0.0303 0.944 Testis EUR eQTL TTLL6 Prostate CGS35 1.57e-17 0.0308 5.28e-17 0.102 0.867 Testis EUR eQTL USP20 Prostate CGS35 8.55e-08 6.92e-05 4.92e-06 0.00299 0.997 Testis EUR eQTL ZBTB38 Prostate CGS35 1.68e-06 0.000471 0.000454 0.127 0.873 Testis EUR eQTL SLC39A1 Prostate CGS35 0.0254 0.0339 0.0064 0.00762 0.927 Testis EUR sQTL USP20 Prostate CGS35 5.13e-12 7.34e-06 1.4e-09 0.000999 0.999 Testis EUR sQTL DNAJB8-AS1 Prostate CGS36 0.000461 0.0474 0.000161 0.0157 0.936 Testis EAS 3'aQTL C5orf38 Prostate CGS36 0.0233 0.000465 0.083 0.000759 0.892 Testis EAS eQTL LDAH Prostate CGS36 6.37e-18 0.000294 5.68e-16 0.0252 0.974 Testis EAS eQTL NKX3-1 Prostate CGS36 5.4e-31 7.65e-31 0.0251 0.0347 0.94 Testis EAS eQTL POU5F1B Prostate CGS36 5.9e-11 0.0558 7.46e-12 0.00613 0.938 Testis EAS eQTL SHANK1 Prostate CGS36 0.00285 0.000847 0.11 0.032 0.854 Testis EAS eQTL RYR1 Prostate CGS37 3.39e-09 1.58e-10 0.214 0.00918 0.776 Testis EUR 3'aQTL SLC25A37 Prostate CGS37 0.00505 0.0566 0.000682 0.0067 0.931 Testis EUR 3'aQTL LKAAEAR1 Prostate CGS37 2.48e-11 0.000924 5.17e-10 0.0183 0.981 Testis EUR eQTL TCEA2 Prostate CGS37 2.65e-06 0.00046 6.42e-05 0.0102 0.989 Testis EUR eQTL ZNF571-AS1 Prostate CGS37 0.0289 0.126 0.0156 0.0675 0.762 Testis EUR eQTL SPATA33 Skin CGS38 4.18e-05 9.06e-06 0.174 0.037 0.789 Testis EUR eQTL RYBP Skin CGS39 0.00682 0.00366 0.128 0.068 0.793 Testis EUR 3'aQTL SPATA33 Skin CGS39 1.38e-08 3.17e-09 0.17 0.0383 0.792 Testis EUR 3'aQTL ARNT Skin CGS39 0.000101 0.000377 0.0296 0.11 0.86 Testis EUR eQTL CDK10 Skin CGS39 8.12e-08 7.8e-08 0.00104 0 0.999 Testis EUR eQTL GOLGA8M Skin CGS39 2.67e-12 2.4e-12 0.0346 0.0302 0.935 Testis EUR eQTL IRF4 Skin CGS39 7.82e-10 1.43e-10 0.104 0.0182 0.877 Testis EUR eQTL KRT75 Skin CGS39 0.00347 9.11e-05 0.071 0.000941 0.925 Testis EUR eQTL LINGO4 Skin CGS39 3.35e-08 0.00153 2.8e-06 0.126 0.872 Testis EUR eQTL MRPS21 Skin CGS39 2.35e-17 0.00427 3.34e-16 0.0596 0.936 Testis EUR eQTL RHOU Skin CGS39 0.0128 0.00477 0.0349 0.012 0.935 Testis EUR eQTL CDK10 Skin CGS39 1.73e-10 3.02e-12 0.0541 0 0.946 Testis EUR sQTL SPATA33 Skin CGS39 1.27e-11 4.88e-14 0.206 0 0.794 Testis EUR sQTL CDK10 Skin CGS40 0.0449 0.0423 0.000969 0 0.912 Testis EUR eQTL CENPBD1 Skin CGS40 9.78e-12 3.54e-09 0.000342 0.123 0.877 Testis EUR eQTL GOLGA8M Skin CGS40 0.0474 0.0419 0.046 0.0398 0.825 Testis EUR eQTL IRF4 Skin CGS40 0.00067 0.000122 0.118 0.0206 0.861 Testis EUR eQTL CDK10 Skin CGS41 0.102 0.0961 0.000851 0 0.801 Testis EUR eQTL CENPBD1 Skin CGS41 1.51e-07 5.47e-05 0.000341 0.122 0.877 Testis EUR eQTL SLC2A4RG Female genital organs CGS46 0.000746 2.93e-05 0.211 0.00753 0.78 Testis EUR eQTL