Gene_name Class CGID Hypp0 Hypp1 Hypp2 Hypp3 Hypp4 Tissue Population xQTL CHMP1A Basal cell carcinoma CGS01 1.94e-16 6.96e-15 0.00635 0.227 0.767 Whole_Blood EUR eQTL CPNE7 Basal cell carcinoma CGS01 0.00349 0.0122 0.0493 0.172 0.763 Whole_Blood EUR eQTL DEF8 Basal cell carcinoma CGS01 1.44e-11 7.83e-12 0.0225 0.0113 0.966 Whole_Blood EUR eQTL CDK10 Basal cell carcinoma CGS01 0.0894 0.0169 0.0047 0 0.889 Whole_Blood EUR sQTL RPF1 Bone CGS55 0.00604 0.0944 0.00208 0.0316 0.866 Whole_Blood EUR eQTL ABHD16B Breast CGS02 0.181 0.00431 0.06 0.000678 0.755 Whole_Blood EUR 3'aQTL NSUN4 Breast CGS02 1.92e-14 0.000318 7.37e-12 0.122 0.878 Whole_Blood EUR 3'aQTL RPL28 Breast CGS02 0.0547 0.00548 0.134 0.0126 0.793 Whole_Blood EUR 3'aQTL ZNF710 Breast CGS02 3.03e-05 4.35e-06 0.026 0.00276 0.971 Whole_Blood EUR 3'aQTL APTX Breast CGS02 0.000127 0.000821 0.0154 0.0986 0.885 Whole_Blood EUR eQTL ARL4D Breast CGS02 4.91e-10 5.62e-07 6.03e-05 0.068 0.932 Whole_Blood EUR eQTL C1QBP Breast CGS02 5.52e-06 1.78e-05 0.0103 0.0322 0.957 Whole_Blood EUR eQTL CAD Breast CGS02 3.94e-12 3.59e-11 0.00659 0.0591 0.934 Whole_Blood EUR eQTL CHP1 Breast CGS02 1.52e-07 6.59e-06 0.00261 0.112 0.885 Whole_Blood EUR eQTL CSF3R Breast CGS02 0.0698 0.0326 0.00667 0.00222 0.889 Whole_Blood EUR eQTL DDX17 Breast CGS02 8.34e-31 5e-09 3.58e-24 0.0205 0.98 Whole_Blood EUR eQTL DIDO1 Breast CGS02 5.09e-08 2.09e-06 0.000588 0.0231 0.976 Whole_Blood EUR eQTL DNAJA1 Breast CGS02 6e-04 0.000294 0.073 0.0348 0.891 Whole_Blood EUR eQTL FAAH Breast CGS02 4.6e-31 2.95e-05 1.77e-28 0.0104 0.99 Whole_Blood EUR eQTL FGFR4 Breast CGS02 5.65e-35 3.49e-29 2.27e-08 0.013 0.987 Whole_Blood EUR eQTL GID8 Breast CGS02 8.52e-06 5.14e-06 0.0979 0.0582 0.844 Whole_Blood EUR eQTL GORASP2 Breast CGS02 7.14e-15 5.3e-15 0.128 0.0945 0.777 Whole_Blood EUR eQTL HAT1 Breast CGS02 2.6e-15 0.000101 3.19e-13 0.0114 0.989 Whole_Blood EUR eQTL HELB Breast CGS02 6.81e-33 0.0533 5.9e-33 0.0453 0.901 Whole_Blood EUR eQTL HSPBP1 Breast CGS02 6.15e-06 1.24e-07 0.191 0.00305 0.806 Whole_Blood EUR eQTL ITPKA Breast CGS02 1.27e-05 0.000259 0.0108 0.22 0.769 Whole_Blood EUR eQTL JOSD1 Breast CGS02 1.61e-11 4.56e-09 0.000397 0.112 0.888 Whole_Blood EUR eQTL KDELR3 Breast CGS02 7.69e-09 5.06e-09 0.111 0.0723 0.817 Whole_Blood EUR eQTL KRTCAP3 Breast CGS02 1.22e-19 1.36e-11 2.13e-10 0.0228 0.977 Whole_Blood EUR eQTL LINC00654 Breast CGS02 1.02e-09 0.095 7.13e-11 0.00574 0.899 Whole_Blood EUR eQTL MAK Breast CGS02 0.000408 0.00086 0.0159 0.0325 0.95 Whole_Blood EUR eQTL MAP6D1 Breast CGS02 3.62e-05 0.000235 0.00668 0.0423 0.951 Whole_Blood EUR eQTL MORN3 Breast CGS02 3.53e-21 0.0809 1.94e-21 0.0437 0.875 Whole_Blood EUR eQTL MTOR Breast CGS02 1.24e-16 0.0333 1.41e-16 0.037 0.93 Whole_Blood EUR eQTL NBR1 Breast CGS02 1.01e-07 5.31e-07 0.0124 0.0643 0.923 Whole_Blood EUR eQTL NBR2 Breast CGS02 2.01e-54 3.74e-07 2.47e-49 0.0449 0.955 Whole_Blood EUR eQTL NDUFAF1 Breast CGS02 3.25e-10 0.000264 1.68e-07 0.136 0.864 Whole_Blood EUR eQTL NRBP1 Breast CGS02 7.22e-20 3.29e-11 1.26e-10 0.0567 0.943 Whole_Blood EUR eQTL NSUN4 Breast CGS02 5.88e-95 0.000141 2.26e-92 0.0534 0.946 Whole_Blood EUR eQTL OIP5-AS1 Breast CGS02 0.0066 0.0101 0.0524 0.0794 0.852 Whole_Blood EUR eQTL PGAP3 Breast CGS02 4.02e-06 1.38e-05 0.00598 0.0195 0.975 Whole_Blood EUR eQTL PNP Breast CGS02 1.88e-20 9.28e-07 6.97e-17 0.00244 0.998 Whole_Blood EUR eQTL PPM1G Breast CGS02 5.61e-12 2.51e-11 0.00981 0.043 0.947 Whole_Blood EUR eQTL RAD54L Breast CGS02 0.00258 8.47e-05 0.187 0.00531 0.805 Whole_Blood EUR eQTL SYCP2L Breast CGS02 2.09e-65 6.17e-16 9.64e-53 0.00184 0.998 Whole_Blood EUR eQTL VAT1 Breast CGS02 1.38e-08 9.12e-07 0.00169 0.111 0.887 Whole_Blood EUR eQTL SRD5A1 Breast CGS02 0.000833 8.84e-05 0.198 0.0202 0.781 Whole_Blood EUR sQTL AMFR Breast CGS03 3.78e-21 0.000491 7.46e-19 0.0959 0.904 Whole_Blood EUR 3'aQTL APOBEC3A Breast CGS03 8.78e-22 2.27e-06 9.36e-19 0.00142 0.999 Whole_Blood EUR 3'aQTL APOBEC3B Breast CGS03 2.39e-18 3.45e-06 2.55e-15 0.00268 0.997 Whole_Blood EUR 3'aQTL ELL Breast CGS03 7.72e-25 9.65e-24 0.00334 0.0408 0.956 Whole_Blood EUR 3'aQTL GATAD2A Breast CGS03 7.12e-08 9.39e-08 0.0948 0.124 0.781 Whole_Blood EUR 3'aQTL ANKRD35 Breast CGS03 2.3e-29 0.0798 2.65e-31 0 0.92 Whole_Blood EUR eQTL APOBEC3A Breast CGS03 3.37e-41 1.22e-08 2.81e-36 1.3e-05 1 Whole_Blood EUR eQTL ATG10 Breast CGS03 1.07e-52 2.56e-08 4.81e-46 0.114 0.886 Whole_Blood EUR eQTL BCAS4 Breast CGS03 2.55e-07 0.0571 5.5e-07 0.122 0.821 Whole_Blood EUR eQTL BECN1 Breast CGS03 2.72e-09 0.0888 1.74e-10 0.00477 0.906 Whole_Blood EUR eQTL CBX6 Breast CGS03 4.68e-21 1.22e-08 3.9e-16 1.3e-05 1 Whole_Blood EUR eQTL CCDC170 Breast CGS03 2.64e-05 0.00075 0.000105 0.00199 0.997 Whole_Blood EUR eQTL CDC7 Breast CGS03 6.91e-25 0.0136 3.42e-25 0.00576 0.981 Whole_Blood EUR eQTL CDKAL1 Breast CGS03 0.00336 0.00451 0.0188 0.0242 0.949 Whole_Blood EUR eQTL CDKN2A Breast CGS03 0.000253 0.00123 0.00236 0.0105 0.986 Whole_Blood EUR eQTL CPT1A Breast CGS03 3.23e-43 2.71e-44 0.171 0.0135 0.815 Whole_Blood EUR eQTL ELL Breast CGS03 1.47e-46 7.49e-24 3.15e-25 0.0151 0.985 Whole_Blood EUR eQTL FARSA Breast CGS03 8.11e-13 0.0129 1.22e-11 0.194 0.794 Whole_Blood EUR eQTL FDPS Breast CGS03 3.55e-05 2.2e-05 0.129 0.0793 0.791 Whole_Blood EUR eQTL HRAS Breast CGS03 5.51e-06 0.0774 8.06e-06 0.112 0.81 Whole_Blood EUR eQTL KCNN4 Breast CGS03 3.31e-64 4.45e-16 6.59e-51 0.00785 0.992 Whole_Blood EUR eQTL LRRC25 Breast CGS03 4.98e-37 2.43e-22 2.05e-18 0 1 Whole_Blood EUR eQTL LYL1 Breast CGS03 0.0136 0.0244 0.026 0.0458 0.89 Whole_Blood EUR eQTL MLX Breast CGS03 0.00402 0.0185 0.0082 0.0369 0.932 Whole_Blood EUR eQTL MUC1 Breast CGS03 1.49e-09 0.000136 2.18e-06 0.197 0.803 Whole_Blood EUR eQTL MYO9B Breast CGS03 0.00016 0.0232 0.00037 0.0529 0.923 Whole_Blood EUR eQTL PIAS3 Breast CGS03 0.0547 0.0754 0.000631 0 0.869 Whole_Blood EUR eQTL PRC1-AS1 Breast CGS03 8.6e-11 3.39e-11 0.172 0.0672 0.76 Whole_Blood EUR eQTL PTDSS2 Breast CGS03 2.21e-05 0.0797 3.29e-05 0.118 0.802 Whole_Blood EUR eQTL PTRHD1 Breast CGS03 8.4e-09 3.82e-07 0.00197 0.0885 0.91 Whole_Blood EUR eQTL RETREG3 Breast CGS03 0.00336 0.00107 0.149 0.0466 0.8 Whole_Blood EUR eQTL SIVA1 Breast CGS03 1.31e-07 0.000332 1.32e-05 0.0324 0.967 Whole_Blood EUR eQTL SLC22A4 Breast CGS03 3.96e-05 0.00183 0.00328 0.151 0.844 Whole_Blood EUR eQTL SSBP4 Breast CGS03 2.57e-24 1.32e-23 0.0159 0.0805 0.904 Whole_Blood EUR eQTL SYT11 Breast CGS03 0.00031 0.00226 0.00305 0.0213 0.973 Whole_Blood EUR eQTL TLR10 Breast CGS03 3.95e-05 3.14e-05 0.00126 0 0.999 Whole_Blood EUR eQTL TMEM237 Breast CGS03 1.88e-09 0.00281 1.51e-08 0.0216 0.976 Whole_Blood EUR eQTL ZFP36L1 Breast CGS03 1.38e-05 1.36e-05 0.0782 0.0762 0.846 Whole_Blood EUR eQTL CCDC91 Breast CGS03 1.29e-12 2.65e-13 0.037 0.00665 0.956 Whole_Blood EUR sQTL POLR2J Breast CGS03 0.00076 0.0023 0.000766 0.00132 0.995 Whole_Blood EUR sQTL SIAH2 Breast CGS04 2.04e-09 9.42e-07 0.000263 0.121 0.879 Whole_Blood EAS eQTL APOBEC3A Breast CGS05 1.29e-38 9.65e-06 1.35e-36 7.56e-06 1 Whole_Blood EUR eQTL CBX6 Breast CGS05 2.69e-18 9.65e-06 2.8e-16 7.49e-06 1 Whole_Blood EUR eQTL CPT1A Breast CGS05 1.36e-08 1.02e-09 0.172 0.0121 0.816 Whole_Blood EUR eQTL MIER3 Breast CGS05 0.0304 0.00813 0.15 0.0392 0.773 Whole_Blood EUR eQTL BMP2 Colorectal CGS07 0.0021 0.00783 0.00815 0.0294 0.952 Whole_Blood EAS eQTL UTP23 Colorectal CGS07 0.000302 0.000429 0.0486 0.0681 0.883 Whole_Blood EAS eQTL CPT1A Breast CGS08 1.07e-08 8e-10 0.172 0.0121 0.816 Whole_Blood EUR eQTL MIER3 Breast CGS08 0.0492 0.0131 0.104 0.0271 0.806 Whole_Blood EUR eQTL MRPL23-AS1 Breast CGS08 6.41e-11 0.0159 8.14e-10 0.201 0.783 Whole_Blood EUR eQTL EVI2A Female genital organs CGS10 3.12e-20 0.00337 1.14e-18 0.123 0.874 Whole_Blood EUR eQTL SKAP1 Female genital organs CGS10 5.6e-08 3.43e-05 0.000108 0.065 0.935 Whole_Blood EUR eQTL SNX11 Female genital organs CGS10 1.33e-17 3.88e-05 6.85e-16 0.000999 0.999 Whole_Blood EUR eQTL RPF1 Eye CGS11 0.000982 0.0153 0.00144 0.0215 0.961 Whole_Blood EUR eQTL ARC Gastric CGS13 1.13e-19 2.3e-14 5.56e-08 0.0103 0.99 Whole_Blood EAS eQTL DAP3 Gastric CGS13 3.57e-12 3.79e-13 0.0277 0.00197 0.97 Whole_Blood EAS eQTL EEF1D Gastric CGS13 4.3e-15 2.24e-16 0.103 0.00447 0.893 Whole_Blood EAS eQTL LYPD2 Gastric CGS13 2.15e-14 1.65e-13 0.0285 0.218 0.754 Whole_Blood EAS eQTL MTX1 Gastric CGS13 9.94e-31 6.13e-31 0.117 0.0715 0.811 Whole_Blood EAS eQTL MUC1 Gastric CGS13 3.12e-36 3.03e-32 1.09e-07 6.13e-05 1 Whole_Blood EAS eQTL PRKAA1 Gastric CGS13 5.25e-15 1.06e-15 0.131 0.0256 0.843 Whole_Blood EAS eQTL SYT11 Gastric CGS13 3.1e-08 2.09e-07 0.000149 0 1 Whole_Blood EAS eQTL THBS3 Gastric CGS13 1.27e-86 1.3e-32 1.49e-57 0.000537 0.999 Whole_Blood EAS eQTL CEACAM7 Lung CGS15 0.0143 0.00141 0.206 0.0196 0.759 Whole_Blood EAS eQTL PSMA4 Lung CGS19 1.1e-08 1.21e-08 0.0697 0.0754 0.855 Whole_Blood EUR 3'aQTL RAD52 Lung CGS19 5.01e-25 5.16e-05 1.24e-22 0.0118 0.988 Whole_Blood EUR eQTL PSMA4 Lung CGS20 9.16e-07 1e-06 0.0865 0.0938 0.82 Whole_Blood EUR 3'aQTL CPT1A Breast CGS21 1.45e-06 1.09e-07 0.171 0.012 0.817 Whole_Blood EUR eQTL WDR61 Lung CGS22 0.00098 0.0594 1.55e-05 0 0.94 Whole_Blood EUR eQTL SLC2A4RG Lung CGS24 0.0446 0.00247 0.177 0.00905 0.767 Whole_Blood EUR 3'aQTL PITPNB Lymphoma CGS28 0.000602 0.0228 0.000406 0.0144 0.962 Whole_Blood EUR eQTL CENPBD1 Melanoma CGS30 1.87e-14 1.65e-14 0.0702 0.0613 0.869 Whole_Blood EUR eQTL CHMP1A Melanoma CGS30 1.46e-30 5.25e-29 0.00451 0.161 0.835 Whole_Blood EUR eQTL CPNE7 Melanoma CGS30 8.78e-09 3.07e-08 0.0436 0.152 0.805 Whole_Blood EUR eQTL CDK10 Melanoma CGS30 1.4e-08 2.65e-09 0.00525 0 0.995 Whole_Blood EUR sQTL BRI3 Prostate CGS35 4.29e-32 3.73e-32 0.0984 0.0848 0.817 Whole_Blood EUR 3'aQTL CRTC2 Prostate CGS35 1.03e-11 3.69e-09 0.000487 0.174 0.825 Whole_Blood EUR 3'aQTL MRPL52 Prostate CGS35 0.000139 0.203 4.3e-06 0.0055 0.792 Whole_Blood EUR 3'aQTL UGP2 Prostate CGS35 1.25e-14 8.41e-15 0.0877 0.0582 0.854 Whole_Blood EUR 3'aQTL VAMP8 Prostate CGS35 7.84e-20 8.74e-20 0.0604 0.0665 0.873 Whole_Blood EUR 3'aQTL ARNT Prostate CGS35 2.49e-25 1.6e-09 5.05e-18 0.0316 0.968 Whole_Blood EUR eQTL BNIPL Prostate CGS35 0.0126 0.0358 0.00517 0.0137 0.933 Whole_Blood EUR eQTL COPRS Prostate CGS35 7.96e-05 2.2e-05 0.162 0.0442 0.793 Whole_Blood EUR eQTL DEDD2 Prostate CGS35 0.00226 0.00235 0.104 0.108 0.783 Whole_Blood EUR eQTL DUSP8 Prostate CGS35 0.0179 0.00985 0.0962 0.0521 0.824 Whole_Blood EUR eQTL GEMIN4 Prostate CGS35 2.05e-08 8.1e-08 0.0363 0.143 0.821 Whole_Blood EUR eQTL GGCX Prostate CGS35 1.95e-66 4.09e-20 1.51e-48 0.0305 0.969 Whole_Blood EUR eQTL MYO9B Prostate CGS35 6.92e-07 1e-04 0.000198 0.0277 0.972 Whole_Blood EUR eQTL NUCKS1 Prostate CGS35 9.73e-10 3.86e-05 1.26e-06 0.0491 0.951 Whole_Blood EUR eQTL PITPNB Prostate CGS35 6.16e-05 0.000312 0.00533 0.026 0.968 Whole_Blood EUR eQTL PMVK Prostate CGS35 4.79e-07 1.86e-06 0.0203 0.078 0.902 Whole_Blood EUR eQTL POLI Prostate CGS35 2.27e-36 0.00128 1.2e-34 0.0666 0.932 Whole_Blood EUR eQTL RNF181 Prostate CGS35 8.49e-06 4.62e-05 0.0121 0.065 0.923 Whole_Blood EUR eQTL SLC39A1 Prostate CGS35 1.06e-17 4.86e-09 1.3e-10 0.0588 0.941 Whole_Blood EUR eQTL SUPT4H1 Prostate CGS35 0.0113 0.0188 0.00768 0.0119 0.95 Whole_Blood EUR eQTL TMEM91 Prostate CGS35 1.52e-31 0.0344 7.64e-33 0.000761 0.965 Whole_Blood EUR eQTL ZBTB7B Prostate CGS35 1.57e-06 2.57e-07 0.027 0.00345 0.97 Whole_Blood EUR eQTL ZFAND4 Prostate CGS35 0.000972 0.14 0.000598 0.0854 0.773 Whole_Blood EUR eQTL ZNF793 Prostate CGS35 0.00219 0.0665 3.07e-05 0 0.931 Whole_Blood EUR eQTL DEDD2 Prostate CGS35 0.138 0.00307 0.079 0.00098 0.779 Whole_Blood EUR sQTL TRIM37 Prostate CGS35 0.0015 0.000586 0.0333 0.012 0.953 Whole_Blood EUR sQTL AGAP7P Prostate CGS36 2.63e-05 0.0333 1.17e-05 0.0138 0.953 Whole_Blood EAS eQTL DIS3 Prostate CGS36 9.95e-09 2.63e-09 0.137 0.0355 0.827 Whole_Blood EAS eQTL LDAH Prostate CGS36 1.56e-13 0.000294 1.39e-11 0.0253 0.974 Whole_Blood EAS eQTL RWDD1 Prostate CGS36 7.2e-06 0.00845 9.02e-05 0.105 0.887 Whole_Blood EAS eQTL SFTPA2 Prostate CGS36 1.83e-05 1.26e-06 0.161 0.0103 0.828 Whole_Blood EAS eQTL THADA Prostate CGS36 7.73e-07 3.87e-06 0.0311 0.155 0.814 Whole_Blood EAS eQTL ZMIZ1-AS1 Prostate CGS36 7.43e-11 9.36e-07 1.27e-06 0.0151 0.985 Whole_Blood EAS eQTL EMC10 Prostate CGS36 0.0362 0.00131 0.0259 0 0.937 Whole_Blood EAS sQTL LKAAEAR1 Prostate CGS37 0.00919 0.00106 0.19 0.0211 0.778 Whole_Blood EUR eQTL OPRL1 Prostate CGS37 2.23e-24 0.000419 5.8e-22 0.108 0.892 Whole_Blood EUR eQTL CHMP1A Skin CGS38 1.99e-08 7.15e-07 0.00429 0.153 0.843 Whole_Blood EUR eQTL PIEZO1 Skin CGS39 0.000136 1.99e-05 0.0731 0.00979 0.917 Whole_Blood EUR 3'aQTL CDK10 Skin CGS39 1.81e-18 2.19e-05 8.3e-17 0 1 Whole_Blood EUR eQTL CENPBD1 Skin CGS39 1.04e-21 4.76e-22 0.035 0.0151 0.95 Whole_Blood EUR eQTL CPNE7 Skin CGS39 1.74e-24 5.22e-24 0.0379 0.113 0.849 Whole_Blood EUR eQTL DEF8 Skin CGS39 2.24e-37 1.11e-37 0.0193 0.00859 0.972 Whole_Blood EUR eQTL HERC2P9 Skin CGS39 9.39e-21 1.95e-12 1.51e-10 0.0304 0.97 Whole_Blood EUR eQTL SCNM1 Skin CGS39 0.000866 0.000508 0.0819 0.0472 0.869 Whole_Blood EUR eQTL CDK10 Skin CGS39 5.72e-08 1.07e-08 0.00534 0 0.995 Whole_Blood EUR sQTL CDK10 Skin CGS40 4.43e-15 0.0527 7.98e-17 0 0.947 Whole_Blood EUR eQTL CENPBD1 Skin CGS40 5.62e-07 2.57e-07 0.1 0.0452 0.854 Whole_Blood EUR eQTL CPNE7 Skin CGS40 0.00545 0.0163 0.0367 0.109 0.833 Whole_Blood EUR eQTL DEF8 Skin CGS40 1.5e-09 7.41e-10 0.0523 0.025 0.923 Whole_Blood EUR eQTL HERC2P9 Skin CGS40 2.53e-10 0.0499 2.94e-10 0.0571 0.893 Whole_Blood EUR eQTL CDK10 Skin CGS41 4.89e-15 0.058 7.95e-17 0 0.942 Whole_Blood EUR eQTL CENPBD1 Skin CGS41 0.000567 0.000259 0.0659 0.0293 0.904 Whole_Blood EUR eQTL DEF8 Skin CGS41 5.93e-05 2.93e-05 0.133 0.0652 0.801 Whole_Blood EUR eQTL AAGAB Thyroid CGS45 7.47e-05 6.77e-05 0.0911 0.0817 0.827 Whole_Blood EUR eQTL C20orf204 Female genital organs CGS46 8.09e-46 0.0294 1.24e-45 0.044 0.927 Whole_Blood EUR eQTL CSTF3 Female genital organs CGS46 1.05e-11 1.78e-12 0.212 0.0352 0.753 Whole_Blood EUR eQTL PITPNB Female genital organs CGS46 1.72e-08 6.68e-07 0.000567 0.0211 0.978 Whole_Blood EUR eQTL SFR1 Female genital organs CGS46 5.62e-07 6.29e-07 0.0649 0.0717 0.863 Whole_Blood EUR eQTL STMN3 Female genital organs CGS46 0.0286 0.0411 0.0217 0.0302 0.878 Whole_Blood EUR sQTL